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An Environmentally Sensitive Fluorescent Dye as a Multidimensional Probe of Amyloid Formation

Accepted version
Peer-reviewed

Type

Article

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Authors

Yates, EV 
Knowles, TPJ 
Dobson, CM 

Abstract

We have explored amyloid formation using poly(amino acid) model systems in which differences in peptide secondary structure and hydrophobicity can be introduced in a controlled manner. We show that an environmentally sensitive fluorescent dye, dapoxyl, is able to identify β-sheet structure and hydrophobic surfaces, structural features likely to be related to toxicity, as a result of changes in its excitation and emission profiles and its relative quantum yield. These results show that dapoxyl is a multidimensional probe of the time dependence of amyloid aggregation, which provides information about the presence and nature of metastable aggregation intermediates that is inaccessible to the conventional probes that rely on changes in quantum yield alone.

Description

Keywords

Amyloid, Fluorescent Dyes, Hydrophobic and Hydrophilic Interactions, Molecular Probes, Protein Structure, Secondary

Journal Title

The Journal of Physical Chemistry Part B

Conference Name

Journal ISSN

1520-6106
1520-5207

Volume Title

120

Publisher

American Chemical Society
Sponsorship
Biotechnology and Biological Sciences Research Council (BB/J002119/1)
The authors acknowledge the European Research Council (ERC), Biotechnology and Biological Sciences Research Council (BBSRC), Wellcome Trust, and Winston Churchill Foundation for financial support.