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Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development.


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Authors

Brisbin, Abra G 
Asmann, Yan W 
Tsai, Ya-Yu 
Aakre, Jeremiah A 

Abstract

BACKGROUND: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24. METHODS: In this study, we completed a meta-analysis of results from nine genome-wide association studies for seven types of solid-tumor cancers (breast, prostate, pancreatic, lung, ovarian, colon, and glioma) to identify additional associations that were not apparent in any individual study. RESULTS: Fifteen SNPs in the 8q24 region had meta-analysis p-values < 1E-04. In particular, the region consisting of 120,576,000-120,627,000 bp contained 7 SNPs with p-values < 1.0E-4, including rs6993464 (p = 1.25E-07). This association lies in the region between two genes, NOV and ENPP2, which have been shown to play a role in tumor development and motility. An additional region consisting of 5 markers from 128,478,000 bp - 128,524,000 (around gene POU5F1B) had p-values < 1E-04, including rs6983267, which had the smallest p-value (p = 6.34E-08). This result replicates previous reports of association between rs6983267 and prostate and colon cancer. CONCLUSIONS: Further research in this area is warranted as these results demonstrate that the chromosomal region 8q24 may contain a locus that influences general cancer susceptibility between 120,576 and 120,630 kb.

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Keywords

Chromosomes, Human, Pair 8, Disease Progression, Genetic Loci, Genome-Wide Association Study, Humans, Neoplasms, Nephroblastoma Overexpressed Protein, Phosphoric Diester Hydrolases, Polymorphism, Single Nucleotide, Proto-Oncogene Mas

Journal Title

BMC Med Genet

Conference Name

Journal ISSN

1471-2350
1471-2350

Volume Title

Publisher

Springer Science and Business Media LLC