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Different modes of variation for each BG lineage suggest different functions.

Published version
Peer-reviewed

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Authors

Chattaway, John 
Ramirez-Valdez, R Andrei 
Chappell, Paul E 
Caesar, Joseph JE 
Lea, Susan M 

Abstract

Mammalian butyrophilins have various important functions, one for lipid binding but others as ligands for co-inhibition of αβ T cells or for stimulation of γδ T cells in the immune system. The chicken BG homologues are dimers, with extracellular immunoglobulin variable (V) domains joined by cysteines in the loop equivalent to complementarity-determining region 1 (CDR1). BG genes are found in three genomic locations: BG0 on chromosome 2, BG1 in the classical MHC (the BF-BL region) and many BG genes in the BG region just outside the MHC. Here, we show that BG0 is virtually monomorphic, suggesting housekeeping function(s) consonant with the ubiquitous tissue distribution. BG1 has allelic polymorphism but minimal sequence diversity, with the few polymorphic residues at the interface of the two V domains, suggesting that BG1 is recognized by receptors in a conserved fashion. Any phenotypic variation should be due to the intracellular region, with differential exon usage between alleles. BG genes in the BG region can generate diversity by exchange of sequence cassettes located in loops equivalent to CDR1 and CDR2, consonant with recognition of many ligands or antigens for immune defence. Unlike the mammalian butyrophilins, there are at least three modes by which BG genes evolve.

Description

Keywords

B-G, SKINT, avian, gene conversion, segmental exchange, selection, Alleles, Alternative Splicing, Amino Acid Sequence, Animals, Avian Proteins, Base Sequence, Butyrophilins, Chickens, Chromosomes, DNA, Complementary, Evolution, Molecular, Exons, Genetic Variation, Models, Chemical, Myelin-Oligodendrocyte Glycoprotein, RNA

Journal Title

Open Biol

Conference Name

Journal ISSN

2046-2441
2046-2441

Volume Title

6

Publisher

The Royal Society
Sponsorship
Wellcome Trust (089305/Z/09/Z)
Wellcome Trust (Grant IDs: RG49834 (Studentship), 089305 and a Senior Investigator Award), Biotechnology and Biological Sciences Research Council (Studentship)