Research data supporting: Germline pathogenic variants in PALB2 and other cancer-predisposing genes in families with hereditary diffuse gastric cancer without CDH1 mutation: a whole-exome sequencing study
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Dataset
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Authors
Fewings, ER
Description
Whole exome sequencing (WES) was performed on DNA extracted from blood obtained as part of the Familial Gastric Cancer Study. Analysis was performed across 39 individuals, both affected and unaffected, from 22 CDH1-NPV families that fulfil the international criteria for HDGC. Data includes an annotated VCF file, an md5 file and sample information. TXT files of data analysed with scripts on https://github.com/elliefewings/Fewings_2017_Gastric_Aug17
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Software / Usage instructions
Data generation described in linked paper. Scripts used can be found at https://github.com/elliefewings/Fewings_2017_Gastric_Aug17
Keywords
Whole exome sequencing, HDGC, Hereditary Diffuse Gastric Cancer, CDH1
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Sponsorship
Funding for this study is specified in publication.