Arctic algae genomes libraries

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Authors
Dorrell, R
Kuo, A
Ibarbalz, F
Rocha Jimenez Vieira, F
Pierella Karlusich, JJ
McFarlane, J
Richardson, E
Publication Date
2018-06-19
Type
Dataset
Metadata
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Citation
Dorrell, R., Kuo, A., Ibarbalz, F., Rocha Jimenez Vieira, F., Pierella Karlusich, J., McFarlane, J., Richardson, E., et al. (2018). Arctic algae genomes libraries [Dataset]. https://doi.org/10.17863/CAM.24227
Description
This library provides taxonomic, biogeographic, protein targeting and evolutionary origin information inferred for four species of photosynthetic nano-flagellate isolated from the Arctic: the cryptomonad CCMP2293; the haptophyte CCMP2436; the chrysophyte CCMP2298; and the pelagophyte CCMP2097, isolated from Baffin Island in summer 1998. Comparative information is also provided for other cryptomonad, haptophyte, PESC clade and pelagophyte species, using information from published genomes and MMETSP transcriptome datasets.
Format
All information is provided as a .zip document, with separate sub-folders containing supporting tables and phylogenies. Each folder contains an individual README file with details of the organisation of the data contained. Supporting tables are provided in .xlsx form, and alignments and phylogenetic information is provided in .nex format.
Keywords
algae, protist, Arctic Ocean, convergent evolution, plastid metabolism
Relationships
Related Item: https://www.biorxiv.org/content/10.1101/2021.07.31.454568v1
Identifiers
This record's DOI: https://doi.org/10.17863/CAM.24227
Rights
Attribution 4.0 International (CC BY 4.0)
Licence URL: https://creativecommons.org/licenses/by/4.0/
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Attribution 4.0 International (CC BY 4.0)
Except where otherwise noted, this item's licence is described as Attribution 4.0 International (CC BY 4.0)