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Building a mechanistic mathematical model of hepatitis C virus entry.

Accepted version
Peer-reviewed

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Type

Article

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Authors

Mincheva, Dilyana 
Illingworth, Christopher JR  ORCID logo  https://orcid.org/0000-0002-0030-2784

Abstract

The mechanism by which hepatitis C virus (HCV) gains entry into cells is a complex one, involving a broad range of host proteins. Entry is a critical phase of the viral lifecycle, and a potential target for therapeutic or vaccine-mediated intervention. However, the mechanics of HCV entry remain poorly understood. Here we describe a novel computational model of viral entry, encompassing the relationship between HCV and the key host receptors CD81 and SR-B1. We conduct experiments to thoroughly quantify the influence of an increase or decrease in receptor availability upon the extent of viral entry. We use these data to build and parameterise a mathematical model, which we then validate by further experiments. Our results are consistent with sequential HCV-receptor interactions, whereby initial interaction between the HCV E2 glycoprotein and SR-B1 facilitates the accumulation CD81 receptors, leading to viral entry. However, we also demonstrate that a small minority of viruses can achieve entry in the absence of SR-B1. Our model estimates the impact of the different obstacles that viruses must surmount to achieve entry; among virus particles attaching to the cell surface, around one third of viruses accumulate sufficient CD81 receptors, of which 4-8% then complete the subsequent steps to achieve productive infection. Furthermore, we make estimates of receptor stoichiometry; in excess of 10 receptors are likely to be required to achieve viral entry. Our model provides a tool to investigate the entry characteristics of HCV variants and outlines a framework for future quantitative studies of the multi-receptor dynamics of HCV entry.

Description

Keywords

Cell Line, Tumor, Computational Biology, Hepacivirus, Hepatitis C, Host-Pathogen Interactions, Humans, Models, Molecular, Receptors, Virus, Virus Internalization

Journal Title

PLoS Comput Biol

Conference Name

Journal ISSN

1553-734X
1553-7358

Volume Title

15

Publisher

Public Library of Science (PLoS)
Sponsorship
Wellcome Trust (101239/Z/13/Z)
Wellcome, Royal Society, Newton Trust