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Discussion of "Gene hunting with hidden Markov model knockoffs'

Published version
Peer-reviewed

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Article

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Abstract

We congratulate the authors on this interesting paper that tackles the difficult problem of extending the work of Candès et al. (2018) to structured predictors possessing a particular type of dependence. Motivated by the aim of making the knockoff construction applicable to genome-wide association studies, Sesia et al. (2019) propose using a hidden Markov model to generate knockoffs that capture patterns of DNA variation, following the work of Scheet & Stephens (2006).

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Keywords

38 Economics, 4905 Statistics, 3802 Econometrics, 49 Mathematical Sciences

Journal Title

Biometrika

Conference Name

Journal ISSN

1464-3510
1464-3510

Volume Title

106

Publisher

Oxford University Press
Sponsorship
Engineering and Physical Sciences Research Council (EP/R018561/1)
MRC (Unknown)
Alan Turing Institute (Unknown)