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The ribosomal P-stalk couples amino acid starvation to GCN2 activation in mammalian cells.

Published version
Peer-reviewed

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Authors

Ordonez, Adriana 
Allen, Felicity 
Parts, Leopold 
Inglis, Alison J 

Abstract

The eukaryotic translation initiation factor 2α (eIF2α) kinase GCN2 is activated by amino acid starvation to elicit a rectifying physiological program known as the Integrated Stress Response (ISR). A role for uncharged tRNAs as activating ligands of yeast GCN2 is supported experimentally. However, mouse GCN2 activation has recently been observed in circumstances associated with ribosome stalling with no global increase in uncharged tRNAs. We report on a mammalian CHO cell-based CRISPR-Cas9 mutagenesis screen for genes that contribute to ISR activation by amino acid starvation. Disruption of genes encoding components of the ribosome P-stalk, uL10 and P1, selectively attenuated GCN2-mediated ISR activation by amino acid starvation or interference with tRNA charging without affecting the endoplasmic reticulum unfolded protein stress-induced ISR, mediated by the related eIF2α kinase PERK. Wildtype ribosomes isolated from CHO cells, but not those with P-stalk lesions, stimulated GCN2-dependent eIF2α phosphorylation in vitro. These observations support a model whereby lack of a cognate charged tRNA exposes a latent capacity of the ribosome P-stalk to activate GCN2 in cells and help explain the emerging link between ribosome stalling and ISR activation.

Description

Keywords

CHO, GCN2, P-stalk, cell biology, genetics, genomics, integrated stress response, p1, p2, ribosome stalling, ul10, Amino Acids, Animals, CHO Cells, CRISPR-Cas Systems, Cricetulus, Endoplasmic Reticulum, Gene Expression Regulation, Enzymologic, HeLa Cells, Humans, Kinetics, Ligands, Mice, Models, Molecular, Mutagenesis, Phosphorylation, Protein Binding, Protein Conformation, Protein Serine-Threonine Kinases, Protein Unfolding, RNA, Transfer, Ribosomes, Signal Transduction, Starvation, Transcriptome, eIF-2 Kinase

Journal Title

Elife

Conference Name

Journal ISSN

2050-084X
2050-084X

Volume Title

8

Publisher

eLife Sciences Publications, Ltd
Sponsorship
Wellcome Trust (200848/Z/16/Z)
Wellcome Trust (100140/Z/12/Z)
This work was supported by Wellcome Trust Principal Research Fellowship to D.R. (Wellcome 200848/Z/16/Z), a Wellcome Trust Strategic Award to the Cambridge Institute for Medical Research (Wellcome 100140) and Cancer Research UK program grant to RLW (C14801/A21211).