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Lamin A/C and Emerin depletion impacts chromatin organization and dynamics in the interphase nucleus.

Published version
Peer-reviewed

Type

Article

Change log

Authors

Ranade, Devika 
Pradhan, Roopali 
Jayakrishnan, Muhunden 
Hegde, Sushmitha 

Abstract

BACKGROUND: Nuclear lamins are type V intermediate filament proteins that maintain nuclear structure and function. Furthermore, Emerin - an interactor of Lamin A/C, facilitates crosstalk between the cytoskeleton and the nucleus as it also interacts with actin and Nuclear Myosin 1 (NM1). RESULTS: Here we show that the depletion of Lamin A/C or Emerin, alters the localization of the nuclear motor protein - Nuclear Myosin 1 (NM1) that manifests as an increase in NM1 foci in the nucleus and are rescued to basal levels upon the combined knockdown of Lamin A/C and Emerin. Furthermore, Lamin A/C-Emerin co-depletion destabilizes cytoskeletal organization as it increases actin stress fibers. This further impinges on nuclear organization, as it enhances chromatin mobility more toward the nuclear interior in Lamin A/C-Emerin co-depleted cells. This enhanced chromatin mobility was restored to basal levels either upon inhibition of Nuclear Myosin 1 (NM1) activity or actin depolymerization. In addition, the combined loss of Lamin A/C and Emerin alters the otherwise highly conserved spatial positions of chromosome territories. Furthermore, knockdown of Lamin A/C or Lamin A/C-Emerin combined, deregulates expression levels of a candidate subset of genes. Amongst these genes, both KLK10 (Chr.19, Lamina Associated Domain (LAD+)) and MADH2 (Chr.18, LAD-) were significantly repressed, while BCL2L12 (Chr.19, LAD-) is de-repressed. These genes differentially reposition with respect to the nuclear envelope. CONCLUSIONS: Taken together, these studies underscore a remarkable interplay between Lamin A/C and Emerin in modulating cytoskeletal organization of actin and NM1 that impinges on chromatin dynamics and function in the interphase nucleus.

Description

Keywords

Actin, Chromosome territories, Emerin, Lamin A/C, Nuclear myosin 1, Nucleus, Actins, Cell Line, Tumor, Cell Nucleus, Chromatin, Chromosome Positioning, Chromosomes, Human, Pair 18, Chromosomes, Human, Pair 19, Cytoskeleton, Gene Expression Regulation, Neoplastic, Gene Knockdown Techniques, Genetic Loci, Humans, Interphase, Kallikreins, Lamin Type A, Membrane Proteins, Muscle Proteins, Myosin Type I, Nuclear Envelope, Nuclear Proteins, Polymerization, Proto-Oncogene Proteins c-bcl-2, RNA, Small Interfering, Smad2 Protein, Transfection

Journal Title

BMC Mol Cell Biol

Conference Name

Journal ISSN

2661-8850
2661-8850

Volume Title

20

Publisher

Springer Science and Business Media LLC