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PomBase 2015: updates to the fission yeast database.

Published version
Peer-reviewed

Type

Article

Change log

Authors

McDowall, Mark D 
Harris, Midori A 
Lock, Antonia 
Rutherford, Kim 
Staines, Daniel M 

Abstract

PomBase (http://www.pombase.org) is the model organism database for the fission yeast Schizosaccharomyces pombe. PomBase provides a central hub for the fission yeast community, supporting both exploratory and hypothesis-driven research. It provides users easy access to data ranging from the sequence level, to molecular and phenotypic annotations, through to the display of genome-wide high-throughput studies. Recent improvements to the site extend annotation specificity, improve usability and allow for monthly data updates. Both in-house curators and community researchers provide manually curated data to PomBase. The genome browser provides access to published high-throughput data sets and the genomes of three additional Schizosaccharomyces species (Schizosaccharomyces cryophilus, Schizosaccharomyces japonicus and Schizosaccharomyces octosporus).

Description

Keywords

Databases, Genetic, Gene Expression, Gene Ontology, Genes, Fungal, Genomics, High-Throughput Nucleotide Sequencing, Internet, Molecular Sequence Annotation, Schizosaccharomyces

Journal Title

Nucleic Acids Res

Conference Name

Journal ISSN

0305-1048
1362-4962

Volume Title

43

Publisher

Oxford University Press (OUP)
Sponsorship
Wellcome Trust (104967/Z/14/Z)
Wellcome Trust (090548/Z/09/Z)