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RNA-Seq reveals changes in human placental metabolism, transport and endocrinology across the first-second trimester transition.

Published version
Peer-reviewed

Type

Article

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Authors

Prater, Malwina 
Hamilton, Russell S  ORCID logo  https://orcid.org/0000-0002-0598-3793
Wa Yung, Hong 
Sharkey, Andrew M 

Abstract

The human placenta is exposed to major environmental changes towards the end of the first trimester associated with full onset of the maternal arterial placental circulation. Changes include a switch from histotrophic to hemotrophic nutrition, and a threefold rise in the intraplacental oxygen concentration. We evaluated their impact on trophoblast development and function using RNA-sequencing (RNA-Seq) and DNA-methylation analyses performed on the same chorionic villous samples at 7-8 (n=8) and 13-14 (n=6) weeks of gestation. Reads were adjusted for fetal sex. Most DEGs were associated with protein processing in the endoplasmic reticulum (ER), hormone secretion, transport, extracellular matrix, vasculogenesis, and reactive oxygen species metabolism. Transcripts higher in the first trimester were associated with synthesis and ER processing of peptide hormones, and glycolytic pathways. Transcripts encoding proteins mediating transport of oxygen, lipids, protein, glucose, and ions were significantly increased in the second trimester. The motifs of CBX3 and BCL6 were significantly overrepresented, indicating the involvement of these transcription factor networks in the regulation of trophoblast migration, proliferation and fusion. These findings are consistent with a high level of cell proliferation and hormone secretion by the early placenta to secure implantation in a physiological low-oxygen environment.

Description

Keywords

Metabolism, Methylation, Transcriptome, Human Pregnancy, Early Placenta

Journal Title

Biology open

Conference Name

Journal ISSN

2046-6390

Volume Title

10

Publisher