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Whole blood-based measurement of SARS-CoV-2-specific T cells reveals asymptomatic infection and vaccine immunogenicity in healthy subjects and patients with solid-organ cancers.

Published version
Peer-reviewed

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Authors

Lippiatt, George 
Somerville, Michelle 
Burnell, Stephanie EA 

Abstract

Accurate assessment of SARS-CoV-2 immunity is critical in evaluating vaccine efficacy and devising public health policies. Whilst the exact nature of effective immunity remains incompletely defined, SARS-CoV-2-specific T-cell responses are a critical feature that will likely form a key correlate of protection against COVID-19. Here, we developed and optimized a high-throughput whole blood-based assay to determine the T-cell response associated with prior SARS-CoV-2 infection and/or vaccination amongst 231 healthy donors and 68 cancer patients. Following overnight in vitro stimulation with SARS-CoV-2-specific peptides, blood plasma samples were analysed for TH 1-type cytokines. Highly significant differential IFN-γ+ /IL-2+ SARS-CoV-2-specific T-cell responses were seen amongst previously infected COVID-19-positive healthy donors in comparison with unknown / naïve individuals (p < 0·0001). IFN-γ production was more effective at identifying asymptomatic donors, demonstrating higher sensitivity (96·0% vs. 83·3%) but lower specificity (84·4% vs. 92·5%) than measurement of IL-2. A single COVID-19 vaccine dose induced IFN-γ and/or IL-2 SARS-CoV-2-specific T-cell responses in 116 of 128 (90·6%) healthy donors, reducing significantly to 27 of 56 (48·2%) when measured in cancer patients (p < 0·0001). A second dose was sufficient to boost T-cell responses in the majority (90·6%) of cancer patients, albeit IFN-γ+ responses were still significantly lower overall than those induced in healthy donors (p = 0·034). Three-month post-vaccination T-cell responses also declined at a faster rate in cancer patients. Overall, this cost-effective standardizable test ensures accurate and comparable assessments of SARS-CoV-2-specific T-cell responses amenable to widespread population immunity testing, and identifies individuals at greater need of booster vaccinations.

Description

Keywords

COVID-19, SARS-CoV-2, T cells, antibodies, vaccine, Adolescent, Adult, Aged, Aged, 80 and over, COVID-19, COVID-19 Vaccines, Carrier State, Female, Humans, Immunity, Cellular, Immunogenicity, Vaccine, Interferon-gamma, Male, Middle Aged, SARS-CoV-2, Th1 Cells, Vaccination

Journal Title

Immunology

Conference Name

Journal ISSN

0019-2805
1365-2567

Volume Title

Publisher

Wiley
Sponsorship
MRC (via University of Birmingham) (NCSi4P programme UOB160998)
Medical Research Council (MR/S00081X/1)
MRC (via University of Nottingham) (MC_PC_20060)