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Identification of 3-(piperazinylmethyl)benzofuran derivatives as novel type II CDK2 inhibitors: design, synthesis, biological evaluation, and in silico insights.

Published version
Peer-reviewed

Type

Article

Change log

Authors

Eldehna, Wagdy M 
Almahli, Hadia 
Al-Warhi, Tarfah 
Elkaeed, Eslam B 

Abstract

In the current work, a hybridisation strategy was adopted between the privileged building blocks, benzofuran and piperazine, with the aim of designing novel CDK2 type II inhibitors. The hybrid structures were linked to different aromatic semicarbazide, thiosemicarbazide, or acylhydrazone tails to anchor the designed inhibitors onto the CDK2 kinase domain. The designed compounds showed promising CDK2 inhibitory activity. Compounds 9h, 11d, 11e and 13c showed potent inhibitory activity (IC50 of 40.91, 41.70, 46.88, and 52.63 nM, respectively) compared to staurosporine (IC50 of 56.76 nM). Moreover, benzofurans 9e, 9h, 11d, and 13b showed promising antiproliferative activities towards different cancer cell lines, and non-significant cytotoxicity on normal lung fibroblasts MRC-5 cell line. Furthermore, a cell cycle analysis as well as Annexin V-FITC apoptosis assay on Panc-1 cell line were performed. Molecular docking simulations were performed to explore the ability of target benzofurans to adopt the common binding pattern of CDK2 type II inhibitors.

Description

Keywords

Kinase inhibitors, apoptotic agents, benzofuran synthesis, molecular docking, pancreatic cancer, Antineoplastic Agents, Benzofurans, Cell Line, Tumor, Cell Proliferation, Drug Screening Assays, Antitumor, Molecular Docking Simulation, Molecular Structure, Protein Kinase Inhibitors, Structure-Activity Relationship

Journal Title

J Enzyme Inhib Med Chem

Conference Name

Journal ISSN

1475-6366
1475-6374

Volume Title

37

Publisher

Informa UK Limited
Sponsorship
Umm Al-Qura University (22UQU4290565DSR02)
The Deanship of Scientific Research at Princess Nourah Bint Abdulrahman University (PNURSP2022R25)