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dc.contributor.authorLyne, Rachel
dc.contributor.authorBazaga, Adrián
dc.contributor.authorButano, Daniela
dc.contributor.authorContrino, Sergio
dc.contributor.authorHeimbach, Joshua
dc.contributor.authorHu, Fengyuan
dc.contributor.authorKalderimis, Alexis
dc.contributor.authorLyne, Mike
dc.contributor.authorReierskog, Kevin
dc.contributor.authorStepan, Radek
dc.contributor.authorSullivan, Julie
dc.contributor.authorWise, Archie
dc.contributor.authorYehudi, Yo
dc.contributor.authorMicklem, Gos
dc.date.accessioned2022-06-24T23:31:08Z
dc.date.available2022-06-24T23:31:08Z
dc.date.issued2022-07-12
dc.identifier.issn1758-0463
dc.identifier.urihttps://www.repository.cam.ac.uk/handle/1810/338366
dc.description.abstractHumanMine (www.humanmine.org) is an integrated database of human genomics and proteomics data that provides a powerful interface to support sophisticated exploration and analysis of data compiled from experimental, computational and curated data sources. Built using the InterMine data integration platform, HumanMine includes genes, proteins, pathways, expression levels, Single nucleotide polymorphism (SNP), diseases and more, integrated into a single searchable database. HumanMine promotes integrative analysis, a powerful approach in modern biology that allows many sources of evidence to be analysed together. The data can be accessed through a user-friendly web interface as well as a powerful, scriptable web service Application programming interface (API) to allow programmatic access to data. The web interface includes a useful identifier resolution system, sophisticated query options and interactive results tables that enable powerful exploration of data, including data summaries, filtering, browsing and export. A set of graphical analysis tools provide a rich environment for data exploration including statistical enrichment of sets of genes or other biological entities. HumanMine can be used for integrative multistaged analysis that can lead to new insights and uncover previously unknown relationships. Database URL: https://www.humanmine.org.
dc.publisherOxford University Press (OUP)
dc.rightsAttribution 4.0 International
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subjectdatabase
dc.subjectbioinformatics
dc.titleHumanMine: advanced data searching, analysis and cross-species comparison.
dc.typeArticle
dc.publisher.departmentDepartment of Genetics
dc.date.updated2022-06-24T10:32:39Z
prism.publicationNameDatabase (Oxford)
dc.identifier.doi10.17863/CAM.85775
dcterms.dateAccepted2022-06-21
rioxxterms.versionofrecord10.1093/database/baac054
rioxxterms.versionAM
dc.contributor.orcidLyne, Rachel [0000-0001-8050-402X]
dc.contributor.orcidMicklem, Gos [0000-0002-6883-6168]
dc.identifier.eissn1758-0463
rioxxterms.typeJournal Article/Review
pubs.funder-project-idWellcome Trust (099133/Z/12/Z)
pubs.funder-project-idWellcome Trust (208381/Z/17/B)
cam.issuedOnline2022-07-12
cam.depositDate2022-06-24
pubs.licence-identifierapollo-deposit-licence-2-1
pubs.licence-display-nameApollo Repository Deposit Licence Agreement


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Attribution 4.0 International
Except where otherwise noted, this item's licence is described as Attribution 4.0 International