CMLSnap: Animated Reaction Mechanisms

Thumbnail
View / Open Files
Authors
Holliday, Gemma L
Mitchell, John BO
Murray-Rust, Peter
Publication Date
2004-10-09
ISSN
1099-8292
Language
en_GB
Type
Article
Metadata
Show full item record
Citation
Holliday, G. L., Mitchell, J. B., & Murray-Rust, P. (2004). CMLSnap: Animated Reaction Mechanisms. http://www.dspace.cam.ac.uk/handle/1810/746
Abstract
Reactions with many steps can be represented by a single XML-based table of the atoms, bonds and electrons. For each step the complete Chemical Markup Language1 representation of all components is given. These snapshots can then be combined to give an animated description of the complete reaction, both in "2D" chemical structure diagrams and in three dimensions. Here we demonstrate the method's power with enzymatic reactions.
Keywords
chemistry, animation, markup languages, CML, XML, SVG, CMLSnap, reaction mechanism
Identifiers
This record's URL: http://www.dspace.cam.ac.uk/handle/1810/746
Rights
Licence:
http://www.rioxx.net/licenses/all-rights-reserved