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Research data supporting "Assessment of the sensitivity of ²H MR spectroscopy measurements of [2,3-²H₂]fumarate metabolism for detecting tumor cell death"


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Zip folder with 8 Excel files containing the raw measurements of main RAW_Figure_1 (1A-C, G-I - Spectra were zero- and first-order phase corrected, and the peaks modelled with the AMARES toolbox), RAW_Figure_2 (Apparent malate production rates were calculated between 0 and 20 min following fumarate administration and plotted against the tumor fumarate concentration at 20 minutes. The curves can be fitted to the Michaelis-Menten equation to obtain an estimate of Km and Vmax), RAW_Figure_3 (3M,3N - Images were analyzed using a CytoNuclear v1.6 algorithm on HALO v3.0.311.293. Shown are percentage of positive cells), RAW_Figure_4 (4A-L - Pearson correlation analysis of histological markers of cell death, CC3 (A – F) and TUNEL (G – L) % positive cells, with the malate/fumarate ratio and malate concentration (mM) obtained by summing the spectra between 20 and 60 min after fumarate injection.) Supplementary_Figure_1 (S1A-C, G-I - Spectra were zero- and first-order phase corrected, and the peaks modelled with the AMARES toolbox, shown are ²H MR spectroscopic measurements of labeled fumarate, malate and water concentrations in MDA-MB-231 tumors following injection of increasing concentrations of [2,3-²H₂]fumarate), RAW_Supplementary_Figure 3 (Tumor malate concentrations before and after treatment with 0.1, 0.4, and 0.8 mg/kg MEDI3039 between 20 and 60 minutes after injecting increasing fumarate concentrations (0.1, 0.3 and 0.5 g/kg)), RAW_Supplementary_Figure_4 (S4A-C - Ratios were obtained by summing the fumarate and malate signals between 20 and 60 min after injection of [2,3-²H₂]fumarate at 0.1, 0.3 and 0.5 g/kg. The malate/fumarate ratio is the dependent variable and was assessed at increasing concentrations of fumarate at each of the MEDI3039 drug concentrations.), Supplementary_Figure_5 (S5A-C - Representative time course data for labeled fumarate, malate and water concentrations with the corresponding coefficients of variance, following injection of increasing concentrations of [2,3-²H₂]fumarate.)

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Excel, MATLAB, Topspin

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Except where otherwised noted, this item's license is described as Attribution 4.0 International (CC BY 4.0)
Sponsorship
This work was supported by grants supported by grants from Cancer Research UK (C197/A29580, C197/A17242, C9685/A25177). F. Hesse received a Cambridge European Scholarship from the Cambridge Trust.