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Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5

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Wagner, Manuel 
Du, Dijun 
Raschka, Stefanie 
Nentwig, Lea-Marie 


Abstract: Pdr5, a member of the extensive ABC transporter superfamily, is representative of a clinically relevant subgroup involved in pleiotropic drug resistance. Pdr5 and its homologues drive drug efflux through uncoupled hydrolysis of nucleotides, enabling organisms such as baker’s yeast and pathogenic fungi to survive in the presence of chemically diverse antifungal agents. Here, we present the molecular structure of Pdr5 solved with single particle cryo-EM, revealing details of an ATP-driven conformational cycle, which mechanically drives drug translocation through an amphipathic channel, and a clamping switch within a conserved linker loop that acts as a nucleotide sensor. One half of the transporter remains nearly invariant throughout the cycle, while its partner undergoes changes that are transmitted across inter-domain interfaces to support a peristaltic motion of the pumped molecule. The efflux model proposed here rationalises the pleiotropic impact of Pdr5 and opens new avenues for the development of effective antifungal compounds.



Article, /631/45/612/1237, /631/57/2283, /631/535/1258/1259, /101/28, /9, /82/83, /64, article

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Nature Communications

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Nature Publishing Group UK
EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) (742210, 742210, 742210)
Deutsche Forschungsgemeinschaft (German Research Foundation) (417919780)