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Implications of AlphaFold2 for crystallographic phasing by molecular replacement.

cam.issuedOnline2022-01-01
dc.contributor.authorMcCoy, Airlie J
dc.contributor.authorSammito, Massimo D
dc.contributor.authorRead, Randy
dc.contributor.orcidSammito, Massimo D [0000-0002-8346-9247]
dc.contributor.orcidRead, Randy [0000-0001-8273-0047]
dc.date.accessioned2022-01-05T16:33:37Z
dc.date.available2022-01-05T16:33:37Z
dc.date.issued2022-01-01
dc.date.submitted2021-05-18
dc.date.updated2022-01-05T16:33:36Z
dc.description.abstractThe AlphaFold2 results in the 14th edition of Critical Assessment of Structure Prediction (CASP14) showed that accurate (low root-mean-square deviation) in silico models of protein structure domains are on the horizon, whether or not the protein is related to known structures through high-coverage sequence similarity. As highly accurate models become available, generated by harnessing the power of correlated mutations and deep learning, one of the aspects of structural biology to be impacted will be methods of phasing in crystallography. Here, the data from CASP14 are used to explore the prospects for changes in phasing methods, and in particular to explore the prospects for molecular-replacement phasing using in silico models.
dc.identifier.doi10.17863/CAM.79535
dc.identifier.eissn2059-7983
dc.identifier.issn2059-7983
dc.identifier.otherayd2qg5003
dc.identifier.otherqg5003
dc.identifier.urihttps://www.repository.cam.ac.uk/handle/1810/332088
dc.languageen
dc.publisherInternational Union of Crystallography (IUCr)
dc.subjectresearch papers
dc.subjectprotein structure prediction
dc.subjectcrystallographic phase problem
dc.subjectmolecular replacement
dc.subjectAlphaFold2
dc.titleImplications of AlphaFold2 for crystallographic phasing by molecular replacement.
dc.typeArticle
dcterms.dateAccepted2021-11-13
prism.publicationNameActa Crystallogr D Struct Biol
pubs.funder-project-idWellcome Trust (209407/Z/17/Z)
rioxxterms.licenseref.urihttp://creativecommons.org/licenses/by/4.0/
rioxxterms.versionVoR
rioxxterms.versionofrecord10.1107/S2059798321012122

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