Gene expression regulation by the Chromodomain helicase DNA-binding protein 9 (CHD9) chromatin remodeler is dispensable for murine development.
Published version
Peer-reviewed
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Repository DOI
Type
Article
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Authors
Alendar, Andrej https://orcid.org/0000-0001-8271-3650
Lambooij, Jan-Paul
Bhaskaran, Rajith
Lancini, Cesare
Song, Ji-Ying
Abstract
Chromodomain helicase DNA-binding (CHD) chromatin remodelers regulate transcription and DNA repair. They govern cell-fate decisions during embryonic development and are often deregulated in human pathologies. Chd1-8 show upon germline disruption pronounced, often developmental lethal phenotypes. Here we show that contrary to Chd1-8 disruption, Chd9-/-animals are viable, fertile and display no developmental defects or disease predisposition. Germline deletion of Chd9 only moderately affects gene expression in tissues and derived cells, whereas acute depletion in human cancer cells elicits more robust changes suggesting that CHD9 is a highly context-dependent chromatin regulator that, surprisingly, is dispensable for mouse development.
Description
Keywords
Animals, Cell Line, Cells, Cultured, Chromatin, Chromatin Assembly and Disassembly, DNA Helicases, Embryonic Development, Gene Expression Regulation, Developmental, Gene Knockout Techniques, Germ-Line Mutation, Humans, K562 Cells, Mice, Mouse Embryonic Stem Cells, Trans-Activators
Journal Title
PLoS One
Conference Name
Journal ISSN
1932-6203
1932-6203
1932-6203
Volume Title
15
Publisher
Public Library of Science (PLoS)
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Sponsorship
KWF Kankerbestrijding (Queen Wilhelmina Research Prize)