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Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity.

Published version
Peer-reviewed

Type

Article

Change log

Authors

Volz, Erik 
Hill, Verity 
McCrone, John T 
Price, Anna 
Jorgensen, David 

Abstract

Global dispersal and increasing frequency of the SARS-CoV-2 spike protein variant D614G are suggestive of a selective advantage but may also be due to a random founder effect. We investigate the hypothesis for positive selection of spike D614G in the United Kingdom using more than 25,000 whole genome SARS-CoV-2 sequences. Despite the availability of a large dataset, well represented by both spike 614 variants, not all approaches showed a conclusive signal of positive selection. Population genetic analysis indicates that 614G increases in frequency relative to 614D in a manner consistent with a selective advantage. We do not find any indication that patients infected with the spike 614G variant have higher COVID-19 mortality or clinical severity, but 614G is associated with higher viral load and younger age of patients. Significant differences in growth and size of 614G phylogenetic clusters indicate a need for continued study of this variant.

Description

Keywords

COVID-19, SARS-CoV-2, epidemiology, evolution, founder effect, spike, Amino Acid Substitution, Aspartic Acid, COVID-19, Genome, Viral, Glycine, Humans, Mutation, SARS-CoV-2, Spike Glycoprotein, Coronavirus, United Kingdom, Virulence, Whole Genome Sequencing

Journal Title

Cell

Conference Name

Journal ISSN

0092-8674
1097-4172

Volume Title

184

Publisher

Elsevier BV
Sponsorship
MRC (MC_PC_19027)
UK Research and Innovation (MC_PC_19027)
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