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Identification of amino acids within norovirus polymerase involved in RNA binding and viral replication.

Accepted version
Peer-reviewed

Type

Article

Change log

Authors

Han, Kang Rok 
Alhatlani, Bader Y 
Cho, Sunyoung 
Lee, Ji-Hye 

Abstract

Until recently, molecular studies on human norovirus (HuNoV), a major causative agent of gastroenteritis, have been hampered by the lack of an efficient cell culture system. Murine norovirus-1 (MNV-1) has served as a surrogate model system for norovirus research, due to the availability of robust cell culture systems and reverse genetics. To identify amino acids involved in RNA synthesis by the viral RNA-dependent RNA polymerase (NS7), we constructed NS7 mutants in which basic amino acids surrounding the catalytic site were substituted with alanine. Electrophoretic mobility shift assay revealed that these residues are important for RNA binding, particularly R396. Furthermore, in vitro RNA synthesis and reverse genetics were used to identify conserved amino acids essential for RNA synthesis and viral replication. These results provide additional functional insights into highly conserved amino acids in NS7 and provide potential methods of rational attenuation of norovirus replication.

Description

Keywords

Amino Acid Substitution, Amino Acids, Animals, Binding Sites, Cell Line, Cricetinae, DNA Mutational Analysis, Electrophoretic Mobility Shift Assay, Mutagenesis, Site-Directed, Norovirus, Protein Binding, RNA, Viral, RNA-Dependent RNA Polymerase, Reverse Genetics, Virus Replication

Journal Title

J Gen Virol

Conference Name

Journal ISSN

0022-1317
1465-2099

Volume Title

98

Publisher

Microbiology Society
Sponsorship
Wellcome Trust (097997/Z/11/Z)
This study was supported by grants from the Korea Healthcare Technology R&D Project, Ministry for Health, Welfare & Family Affairs (A085119) and Basic Science Research Programs through NRF funded by the Ministry of Education (NRF-2013R1A1A2064940, L.J.-H. and NRF-2016R1A6A3A01012238, K.R.H.). BA was supported by funding from Qassim University, Saudi Arabia, and the work in the lab of IG is supported by the Wellcome Trust (097997/Z/11/Z). K.R.H. was a recipient of postdoctoral fellowship from the BK21+ program. IG is a Wellcome Senior Fellow.