Experimental evidence of symmetry breaking of transition-path times.
dc.contributor.author | Gladrow, J | |
dc.contributor.author | Ribezzi-Crivellari, M | |
dc.contributor.author | Ritort, F | |
dc.contributor.author | Keyser, UF | |
dc.date.accessioned | 2019-01-18T00:30:31Z | |
dc.date.available | 2019-01-18T00:30:31Z | |
dc.date.issued | 2019-01-04 | |
dc.identifier.issn | 2041-1723 | |
dc.identifier.uri | https://www.repository.cam.ac.uk/handle/1810/288146 | |
dc.description.abstract | While thermal rates of state transitions in classical systems have been studied for almost a century, associated transition-path times have only recently received attention. Uphill and downhill transition paths between states at different free energies should be statistically indistinguishable. Here, we systematically investigate transition-path-time symmetry and report evidence of its breakdown on the molecular- and meso-scale out of equilibrium. In automated Brownian dynamics experiments, we establish first-passage-time symmetries of colloids driven by femtoNewton forces in holographically-created optical landscapes confined within microchannels. Conversely, we show that transitions which couple in a path-dependent manner to fluctuating forces exhibit asymmetry. We reproduce this asymmetry in folding transitions of DNA-hairpins driven out of equilibrium and suggest a topological mechanism of symmetry breakdown. Our results are relevant to measurements that capture a single coordinate in a multidimensional free energy landscape, as encountered in electrophysiology and single-molecule fluorescence experiments. | |
dc.description.sponsorship | (J.G.) European Training Network (ETN) Grant No. 674979-NANOTRANS (J.G.) Winton Programme for the Physics of Sustainability (M.R.C.) European Unions Horizon 2020 Marie Skłodowska-Curie grant agreement No. 749944 (U.F.K.) ERC Consolidator Grant (DesignerPores 647144) (F.R.) Spanish Research Council [FIS2016-80458-P] (F.R.) Catalan Government [Icrea Academia prize 2013] (F.R.) EU [Proseqo, FETOPEN, Proposal 687089] | |
dc.format.medium | Electronic | |
dc.language | eng | |
dc.publisher | Springer Science and Business Media LLC | |
dc.rights | Attribution 4.0 International | |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
dc.subject | DNA | |
dc.subject | Protein Folding | |
dc.subject | Kinetics | |
dc.subject | Thermodynamics | |
dc.subject | Models, Chemical | |
dc.subject | Models, Molecular | |
dc.subject | Inverted Repeat Sequences | |
dc.subject | Molecular Dynamics Simulation | |
dc.title | Experimental evidence of symmetry breaking of transition-path times. | |
dc.type | Article | |
prism.issueIdentifier | 1 | |
prism.publicationDate | 2019 | |
prism.publicationName | Nat Commun | |
prism.startingPage | 55 | |
prism.volume | 10 | |
dc.identifier.doi | 10.17863/CAM.35462 | |
dcterms.dateAccepted | 2018-11-11 | |
rioxxterms.versionofrecord | 10.1038/s41467-018-07873-9 | |
rioxxterms.version | VoR | |
rioxxterms.licenseref.uri | http://www.rioxx.net/licenses/all-rights-reserved | |
rioxxterms.licenseref.startdate | 2019-01-04 | |
dc.contributor.orcid | Keyser, UF [0000-0003-3188-5414] | |
dc.identifier.eissn | 2041-1723 | |
rioxxterms.type | Journal Article/Review | |
pubs.funder-project-id | European Commission Horizon 2020 (H2020) Marie Sk?odowska-Curie actions (674979) | |
pubs.funder-project-id | European Research Council (647144) | |
cam.issuedOnline | 2019-01-04 | |
rioxxterms.freetoread.startdate | 2100-01-01 |
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