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InterMine: extensive web services for modern biology.

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cam.issuedOnline2014-04-21
dc.contributor.authorKalderimis, Alex
dc.contributor.authorLyne, Rachel
dc.contributor.authorButano, Daniela
dc.contributor.authorContrino, Sergio
dc.contributor.authorLyne, Mike
dc.contributor.authorHeimbach, Joshua
dc.contributor.authorHu, Fengyuan
dc.contributor.authorSmith, Richard
dc.contributor.authorStěpán, Radek
dc.contributor.authorSullivan, Julie
dc.contributor.authorMicklem, Gos
dc.contributor.orcidLyne, Rachel [0000-0001-8050-402X]
dc.contributor.orcidMicklem, Gos [0000-0002-6883-6168]
dc.date.accessioned2018-09-05T12:48:52Z
dc.date.available2018-09-05T12:48:52Z
dc.date.issued2014-07
dc.description.abstractInterMine (www.intermine.org) is a biological data warehousing system providing extensive automatically generated and configurable RESTful web services that underpin the web interface and can be re-used in many other applications: to find and filter data; export it in a flexible and structured way; to upload, use, manipulate and analyze lists; to provide services for flexible retrieval of sequence segments, and for other statistical and analysis tools. Here we describe these features and discuss how they can be used separately or in combinations to support integrative and comparative analysis.
dc.format.mediumPrint-Electronic
dc.identifier.doi10.17863/CAM.26949
dc.identifier.eissn1362-4962
dc.identifier.issn0305-1048
dc.identifier.urihttps://www.repository.cam.ac.uk/handle/1810/279577
dc.languageeng
dc.language.isoeng
dc.publisherOxford University Press (OUP)
dc.publisher.urlhttp://dx.doi.org/10.1093/nar/gku301
dc.rightsAttribution 4.0 International (CC BY 4.0)
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subjectAnimals
dc.subjectChromosomes
dc.subjectDatabases, Factual
dc.subjectHumans
dc.subjectInternet
dc.subjectMice
dc.subjectSequence Analysis, DNA
dc.subjectSoftware
dc.subjectUser-Computer Interface
dc.titleInterMine: extensive web services for modern biology.
dc.typeArticle
prism.endingPageW472
prism.issueIdentifierWeb Server issue
prism.publicationDate2014
prism.publicationNameNucleic Acids Res
prism.startingPageW468
prism.volume42
pubs.funder-project-idNational Human Genome Research Institute (R01HG004834)
pubs.funder-project-idWellcome Trust (099133/Z/12/Z)
pubs.funder-project-idNational Institutes of Health (NIH) (via Ontario Institute for Cancer Research (OICR)) (U41HG0004269-05S1)
pubs.funder-project-idWellcome Trust (090297/Z/09/Z)
rioxxterms.licenseref.startdate2014-07
rioxxterms.licenseref.urihttp://www.rioxx.net/licenses/all-rights-reserved
rioxxterms.typeJournal Article/Review
rioxxterms.versionVoR
rioxxterms.versionofrecord10.1093/nar/gku301

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