Theses - EMBL-EBI
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Recent Submissions
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Genome-graph based genotyping with applications to highly variable genes in P. falciparum
Analysing genetic variation in pathogen genomes is key to understanding their biology, evolution and epidemiology. Typically, this is done by assembling one arbitrary genome, defined as the ‘reference’, and describing other ... -
Advances in Time-to-Event Analysis: Big Data Applications in Cancer Risk Prediction
The digital transformation of health care provides new opportunities to study dis- ease and gain unprecedented insights into the underlying biology. With the wealth of data generated, new statistical challenges arise. This ... -
Multiomic Investigation of the Human Gut Toward Insight into Childhood Inflammatory Bowel Disease Pathogenesis
Inflammatory bowel disease (IBD) is an abnormal immune response to the gut microbiome causing chronic debilitating pain in genetically susceptible people. The development of effective therapies for this condition is hampered ... -
Recovery and quality estimation of metagenomic assembled genomes of eukaryotes
Microorganisms are found in virtually all environments, and while the majority of microorganisms are often prokaryotes, by biomass there are suspected to be 6 times more prokaryotes than fungi globally (Bar-On et al., ...
