Repository logo
 

pedigreejs: a web-based graphical pedigree editor.

Published version
Peer-reviewed

Type

Article

Change log

Authors

Carver, Tim 
Cunningham, Alex P 
Babb de Villiers, Chantal 
Hartley, Simon 

Abstract

MOTIVATION: The collection, management and visualization of clinical pedigree (family history) data is a core activity in clinical genetics centres. However, clinical pedigree datasets can be difficult to manage, as they are time consuming to capture, and can be difficult to build, manipulate and visualize graphically. Several standalone graphical pedigree editors and drawing applications exist but there are no freely available lightweight graphical pedigree editors that can be easily configured and incorporated into web applications. RESULTS: We developed 'pedigreejs', an interactive graphical pedigree editor written in JavaScript, which uses standard pedigree nomenclature. Pedigreejs provides an easily configurable, extensible and lightweight pedigree editor. It makes use of an open-source Javascript library to define a hierarchical layout and to produce images in scalable vector graphics (SVG) format that can be viewed and edited in web browsers. AVAILABILITY AND IMPLEMENTATION: The software is freely available under GPL licence (https://ccge-boadicea.github.io/pedigreejs/). CONTACT: tjc29@cam.ac.uk. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Description

Keywords

Female, Humans, Internet, Male, Medical History Taking, Pedigree, Software, Web Browser

Journal Title

Bioinformatics

Conference Name

Journal ISSN

1367-4803
1367-4811

Volume Title

34

Publisher

Oxford University Press (OUP)
Sponsorship
Cancer Research UK (20861)
Wellcome Trust (203477/B/16/Z)
European Commission Horizon 2020 (H2020) Societal Challenges (634935)
European Commission Horizon 2020 (H2020) Societal Challenges (633784)
Cancer Research UK (16563)
Wellcome Trust (203477/Z/16/Z)