Repository logo
 

Pulsed SILAC as a Approach for miRNA Targets Identification in Cell Culture.

Accepted version
Peer-reviewed

No Thumbnail Available

Type

Article

Change log

Authors

Duque-Guimarães, Daniella E 
de Almeida-Faria, Juliana 
Ong, Thomas Prates 
Ozanne, Susan E 

Abstract

Pulsed stable isotope labeling by amino acids in cell culture (pSILAC) comprises a variation of the classical SILAC proteomic methodology that enables the identification of short-term proteomic responses such as those elicited by micro RNAs (miRNAs). Here, we describe a detailed pSILAC protocol for global identification and quantification of protein translation alterations induced by a miRNA using 3T3-L1 pre-adipocytes as a model system.

Description

Keywords

Cell culture, MicroRNAs, Proteomics, Pulsed stable isotope labeling by amino acids, Targets, Amino Acids, Cell Culture Techniques, Cells, Cultured, Gene Expression Regulation, Humans, Isotope Labeling, MicroRNAs, Protein Biosynthesis, Proteomics, RNA Interference, RNA, Messenger, Software, Workflow

Journal Title

Methods Mol Biol

Conference Name

Journal ISSN

1064-3745
1940-6029

Volume Title

1546

Publisher

Springer New York
Sponsorship
Medical Research Council (MC_UU_12012/4)
Biotechnology and Biological Sciences Research Council (BB/M001636/1)
British Heart Foundation (None)
British Heart Foundation (None)
Medical Research Council (MC_PC_12012)