dsSurvival: Privacy preserving survival models for federated individual patient meta-analysis in DataSHIELD
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Authors
Sofack, Ghislain
Papakonstantinou, Thodoris
Avraam, Demetris
Burton, Paul
Zoeller, Daniella
Bishop, Tom
Journal Title
BMC Research Notes
ISSN
1756-0500
Publisher
BioMed Central
Type
Article
This Version
VoR
Metadata
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Banerjee, S., Sofack, G., Papakonstantinou, T., Avraam, D., Burton, P., Zoeller, D., & Bishop, T. (2022). dsSurvival: Privacy preserving survival models for federated individual patient meta-analysis in DataSHIELD. BMC Research Notes https://doi.org/10.1186/s13104-022-06085-1
Abstract
Objective Achieving sufficient statistical power in a survival analysis usually requires large amounts of data from different sites. Sensitivity of individual-level data, ethical and practical considerations regarding data sharing across institutions could be a potential challenge for achieving this added power. Hence we implemented a federated meta-analysis approach of survival models in DataSHIELD, where only anonymous aggregated data are shared across institutions, while simultaneously allowing for exploratory, interactive modelling.
In this case, meta-analysis techniques to combine analysis results from each site are a solution, but an analytic workflow involving local analysis undertaken at individual studies hinders exploration. Thus, the aim is to provide a framework for performing meta-analysis of Cox regression models across institutions without manual analysis steps for the data providers.
Results We introduce a package (dsSurvival) which allows privacy preserving meta-analysis of survival models, including the calculation of hazard ratios. Our tool can be of great use in biomedical research where there is a need for building survival models and there are privacy concerns about sharing data.
Identifiers
External DOI: https://doi.org/10.1186/s13104-022-06085-1
This record's URL: https://www.repository.cam.ac.uk/handle/1810/337489
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