Research data supporting "Reassessment of weak parent-of-origin expression bias shows it rarely exists outside of known imprinted regions"
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Allele specific pyrosequencing data was generated from tissues dissected from reciprocal C57BL/6 x CastEiJ mouse crosses. Genes of interest were amplified using qRT-PCR. The levels of expression from each allele were determined using pyrosequencing assays across SNPs in the gene. The data deposited represents the mean of 2 technical replicates.
The dataset also includes sequences from cloned bisufite converted DNA across the Nhlrc1 DMR region. The region of interest contains SNP so parent of origin can be assigned.
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Pyrosequencing data was generated using Qiagen Pyromark.
Bisulfite sequencung data was assessed using BISMA (http://services.ibc.uni-stuttgart.de/BDPC/BISMA/)
Keywords
Allelic Expression Bias, Epigenetics, Genomic Imprinting