Appendices for thesis entitled 'Investigating factors governing cell fate decisions in respiratory  epithelium.' Dr Jo-Anne Johnson, University of Cambridge.

Name: Appendices for thesis entitled 'Investigating factors governing cell fate decisions in respiratory epithelium.' Dr Jo-Anne Johnson, University of Cambridge.
Published: 2018-07-31T14:12:05Z
Keywords: Human embryonic lung RNA Sequencing, Gene ontology, Mouse embryonic lung microarray

Johnson, J

doi:10.17863/CAM.25431

Appendices for thesis entitled 'Investigating factors governing cell fate decisions in respiratory epithelium.' Dr Jo-Anne Johnson, University of Cambridge.

Repository URI

https://www.repository.cam.ac.uk/handle/1810/278591

Repository DOI

https://doi.org/10.17863/CAM.25431

Files

Appendix 1 .xlsx (289.53 KB)

Appendix 2 .xlsx (156.78 KB)

Appendix 3 .xlsx (56.93 KB)

Appendix 4 .xlsx (118.78 KB)

Appendix 5 .xlsx (2.41 MB)

Type

Dataset

Authors

Johnson, J

Description

Appendices for thesis entitled 'Investigating factors governing cell fate decisions in respiratory epithelium.' Dr Jo-Anne Johnson, University of Cambridge.

Software / Usage instructions

Appendix 1-4: Gene ontology analysis of RNAseq data from human lungs at 5 to 9 post-conception weeks gestation. Transcripts in tip (>2FC tip/stalk), stalk (>2FC stalk/tip) and both (<2FC stalk/tip or tip/stalk) are listed in GO categories performed using DAVID Bioinformatics Resources 6.7. Appendices 5-8 - Comparing RNA Seq data from human embryonic lung tips (5 to 9 post-conception weeks gestation) to microarray from mouse embryonic lung tips (E11.5). GO analysis was performed using DAVID Bioinformatics Resources 6.8.