Transcriptional slippage in the positive-sense RNA virus family Potyviridae.
Published version
Peer-reviewed
Repository URI
Repository DOI
Change log
Authors
Abstract
The family Potyviridae encompasses ~30% of plant viruses and is responsible for significant economic losses worldwide. Recently, a small overlapping coding sequence, termed pipo, was found to be conserved in the genomes of all potyvirids. PIPO is expressed as part of a frameshift protein, P3N-PIPO, which is essential for virus cell-to-cell movement. However, the frameshift expression mechanism has hitherto remained unknown. Here, we demonstrate that transcriptional slippage, specific to the viral RNA polymerase, results in a population of transcripts with an additional "A" inserted within a highly conserved GAAAAAA sequence, thus enabling expression of P3N-PIPO. The slippage efficiency is ~2% in Turnip mosaic virus and slippage is inhibited by mutations in the GAAAAAA sequence. While utilization of transcriptional slippage is well known in negative-sense RNA viruses such as Ebola, mumps and measles, to our knowledge this is the first report of its widespread utilization for gene expression in positive-sense RNA viruses.
Description
Keywords
Journal Title
Conference Name
Journal ISSN
1469-3178
Volume Title
Publisher
Publisher DOI
Sponsorship
Biotechnology and Biological Sciences Research Council (BB/J015652/1)
Isaac Newton Trust (1207(1))
Wellcome Trust (106207/Z/14/Z)
Wellcome Trust (088789/Z/09/Z)
Biotechnology and Biological Sciences Research Council (BB/J011762/1)
Wellcome Trust (096082/Z/11/Z)