Self-assembly of two-dimensional binary quasicrystals: A possible route to a DNA quasicrystal
Journal of Physics: Condensed Matter
Institute of Physics
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Reinhardt, A., Schreck, J., Romano, F., & Doye, J. (2017). Self-assembly of two-dimensional binary quasicrystals: A possible route to a DNA quasicrystal. Journal of Physics: Condensed Matter, 29 (1. 014006)https://doi.org/10.1088/0953-8984/29/1/014006
We use Monte Carlo simulations and free-energy techniques to show that binary solutions of penta- and hexavalent two-dimensional patchy particles can form thermodynamically stable quasicrystals even at very narrow patch widths, provided their patch interactions are chosen in an appropriate way. Such patchy particles can be thought of as a coarse-grained representation of DNA multi-arm 'star' motifs, which can be chosen to bond with one another very specifically by tuning the DNA sequences of the protruding arms. We explore several possible design strategies and conclude that DNA star tiles that are designed to interact with one another in a specific but not overly constrained way could potentially be used to construct soft quasicrystals in experiment. We verify that such star tiles can form stable dodecagonal motifs using oxDNA, a realistic coarse-grained model of DNA.
Is supplemented by: https://doi.org/10.17863/cam.4904
This work was supported by the Engineering and Physical Sciences Research Council (Grants EP/I001352/1, EP/J019445/1).
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External DOI: https://doi.org/10.1088/0953-8984/29/1/014006
This record's URL: https://www.repository.cam.ac.uk/handle/1810/261640