InterMine: extensive web services for modern biology.

InterMine (www.intermine.org) is a biological data warehousing system providing extensive automatically generated and configurable RESTful web services that underpin the web interface and can be re-used in many other applications: to find and filter data; export it in a flexible and structured way; to upload, use, manipulate and analyze lists; to provide services for flexible retrieval of sequence segments, and for other statistical and analysis tools. Here we describe these features and discuss how they can be used separately or in combinations to support integrative and comparative analysis.

Keywords

Animals, Chromosomes, Databases, Factual, Humans, Internet, Mice, Sequence Analysis, DNA, Software, User-Computer Interface

Journal Title

Nucleic Acids Res

Journal ISSN

0305-1048
1362-4962

Volume Title

42

Publisher

Oxford University Press (OUP)

Publisher DOI

https://doi.org/10.1093/nar/gku301

Rights and licensing

Except where otherwised noted, this item's license is described as Attribution 4.0 International (CC BY 4.0)

Sponsorship

National Human Genome Research Institute (R01HG004834)
Wellcome Trust (099133/Z/12/Z)
National Institutes of Health (NIH) (via Ontario Institute for Cancer Research (OICR)) (U41HG0004269-05S1)
Wellcome Trust (090297/Z/09/Z)

Collections

University of Cambridge Research Outputs (Articles and Conferences)