InterMine: extensive web services for modern biology.
Published version
Peer-reviewed
Repository URI
Repository DOI
Change log
Authors
Kalderimis, Alex
Lyne, Rachel https://orcid.org/0000-0001-8050-402X
Butano, Daniela
Contrino, Sergio
Lyne, Mike
Abstract
InterMine (www.intermine.org) is a biological data warehousing system providing extensive automatically generated and configurable RESTful web services that underpin the web interface and can be re-used in many other applications: to find and filter data; export it in a flexible and structured way; to upload, use, manipulate and analyze lists; to provide services for flexible retrieval of sequence segments, and for other statistical and analysis tools. Here we describe these features and discuss how they can be used separately or in combinations to support integrative and comparative analysis.
Description
Keywords
Animals, Chromosomes, Databases, Factual, Humans, Internet, Mice, Sequence Analysis, DNA, Software, User-Computer Interface
Journal Title
Nucleic Acids Res
Conference Name
Journal ISSN
0305-1048
1362-4962
1362-4962
Volume Title
42
Publisher
Oxford University Press (OUP)
Publisher DOI
Sponsorship
National Human Genome Research Institute (R01HG004834)
Wellcome Trust (099133/Z/12/Z)
National Institutes of Health (NIH) (via Ontario Institute for Cancer Research (OICR)) (U41HG0004269-05S1)
Wellcome Trust (090297/Z/09/Z)
Wellcome Trust (099133/Z/12/Z)
National Institutes of Health (NIH) (via Ontario Institute for Cancer Research (OICR)) (U41HG0004269-05S1)
Wellcome Trust (090297/Z/09/Z)