Estimation of required sample size for external validation of risk models for binary outcomes
Authors
Qu, Chen
Omar, Rumana Z
Steyerberg, Ewout W
White, Ian R
Ambler, Gareth
Publication Date
2021-04-21Journal Title
Statistical Methods in Medical Research
ISSN
0962-2802
Publisher
SAGE Publications
Volume
30
Issue
10
Pages
2187-2206
Language
en
Type
Article
This Version
VoR
Metadata
Show full item recordCitation
Pavlou, M., Qu, C., Omar, R. Z., Seaman, S. R., Steyerberg, E. W., White, I. R., & Ambler, G. (2021). Estimation of required sample size for external validation of risk models for binary outcomes. Statistical Methods in Medical Research, 30 (10), 2187-2206. https://doi.org/10.1177/09622802211007522
Abstract
Risk-prediction models for health outcomes are used in practice as part of clinical decision-making, and it is essential that their performance be externally validated. An important aspect in the design of a validation study is choosing an adequate sample size. In this paper, we investigate the sample size requirements for validation studies with binary outcomes to estimate measures of predictive performance (C-statistic for discrimination and calibration slope and calibration in the large). We aim for sufficient precision in the estimated measures. In addition, we investigate the sample size to achieve sufficient power to detect a difference from a target value. Under normality assumptions on the distribution of the linear predictor, we obtain simple estimators for sample size calculations based on the measures above. Simulation studies show that the estimators perform well for common values of the C-statistic and outcome prevalence when the linear predictor is marginally Normal. Their performance deteriorates only slightly when the normality assumptions are violated. We also propose estimators which do not require normality assumptions but require specification of the marginal distribution of the linear predictor and require the use of numerical integration. These estimators were also seen to perform very well under marginal normality. Our sample size equations require a specified standard error (SE) and the anticipated C-statistic and outcome prevalence. The sample size requirement varies according to the prognostic strength of the model, outcome prevalence, choice of the performance measure and study objective. For example, to achieve an SE < 0.025 for the C-statistic, 60–170 events are required if the true C-statistic and outcome prevalence are between 0.64–0.85 and 0.05–0.3, respectively. For the calibration slope and calibration in the large, achieving SE < 0.15 would require 40–280 and 50–100 events, respectively. Our estimators may also be used for survival outcomes when the proportion of censored observations is high.
Keywords
Articles, Sample size calculation, prediction model, C-statistic, discrimination, calibration
Sponsorship
Medical Research Council (MC_UU_00002/10, MC_UU_12023/29, MR/P015190/1)
Identifiers
10.1177_09622802211007522
External DOI: https://doi.org/10.1177/09622802211007522
This record's URL: https://www.repository.cam.ac.uk/handle/1810/329360
Rights
Embargo: ends 2021-04-21
Licence:
https://creativecommons.org/licenses/by/4.0/
Statistics
Total file downloads (since January 2020). For more information on metrics see the
IRUS guide.
Recommended or similar items
The current recommendation prototype on the Apollo Repository will be turned off on 03 February 2023. Although the pilot has been fruitful for both parties, the service provider IKVA is focusing on horizon scanning products and so the recommender service can no longer be supported. We recognise the importance of recommender services in supporting research discovery and are evaluating offerings from other service providers. If you would like to offer feedback on this decision please contact us on: support@repository.cam.ac.uk