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Dataset for: First-in-human pilot study of snapshot multispectral endoscopy for early detection of Barrett's-related neoplasia.


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Type

Dataset

Change log

Authors

Waterhouse, Dale 
Bano, Sophia 
Januszewicz, Wladyslaw 
Stoyanov, Dan 
Fitzgerald, Rebecca  ORCID logo  https://orcid.org/0000-0002-3434-3568

Description

Research data and code arising from a first-in-human endoscopy clinical trial (NCT03388047).

Each of the data tables contains 9-point multispectral image spectra created from multispectral images captured using a snapshot multispectral endoscope. The raw images were processed into these image spectra using the code in ‘PROCESSING CODE’. Raw image data can be provided upon request. The tissue spectra were captured in a first-in-human pilot study in the oesophagus. The colour spectra were captured from an X-rite colour target. Each row of the arrays contains the information about the spectra, most importantly, the labels from pathology. The different arrays contain spectra from averages over each multispectral image (processed_tissue_spectra.mat), each patient (processed_tissue_spectra_avg_per_trial.mat and processed_tissue_spectra_avg_per_trial_per_region_then_pooled.mat), and over all patients (processed_tissue_spectra_avg_overall.mat).

Please see included readme files for further details.

Version

Software / Usage instructions

Custom code written in Matlab. Usage instructions are contained within the overall readme file of the data set.

Keywords

multispectral, endoscopy

Publisher

Sponsorship
Cancer Research Uk (None)
Engineering and Physical Sciences Research Council (EP/N014588/1)
Cancer Research UK (21102)
Engineering and Physical Sciences Research Council (EP/R003599/1)
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