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Variance Bounds for a Class of Biochemical Birth/Death Like Processes via a Discrete Expansion and Spectral Properties of the Master Equation

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Peer-reviewed

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Abstract

We consider a class of birth/death like process corresponding to coupled biochemical reactions and consider the problem of quantifying the variance of the molecular species in terms of the rates of the reactions. In particular, we address this problem in a configuration where a species is formed with a rate that depends nonlinearly on another spontaneously formed species. By making use of an appropriately formulated expansion based on the Newton series, in conjunction with spectral properties of the master equation, we derive an analytical expression that provides a hard bound for the variance. We show that this bound is exact when the propensities are linear, with numerical simulations demonstrating that this bound is also very close to the actual variance. An analytical expression for the covariance of the species is also derived.

Description

Journal Title

SIAM E-Journal on Applied Dynamical Systems

Conference Name

Journal ISSN

1536-0040
1536-0040

Volume Title

Publisher

Society for Industrial & Applied Mathematics (SIAM)

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Except where otherwised noted, this item's license is described as Attribution 4.0 International
Sponsorship
EPSRC (2107279)